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2008


Thumb xl jnm
A non-parametric Bayesian alternative to spike sorting

Wood, F., Black, M. J.

J. Neuroscience Methods, 173(1):1–12, August 2008 (article)

Abstract
The analysis of extra-cellular neural recordings typically begins with careful spike sorting and all analysis of the data then rests on the correctness of the resulting spike trains. In many situations this is unproblematic as experimental and spike sorting procedures often focus on well isolated units. There is evidence in the literature, however, that errors in spike sorting can occur even with carefully collected and selected data. Additionally, chronically implanted electrodes and arrays with fixed electrodes cannot be easily adjusted to provide well isolated units. In these situations, multiple units may be recorded and the assignment of waveforms to units may be ambiguous. At the same time, analysis of such data may be both scientifically important and clinically relevant. In this paper we address this issue using a novel probabilistic model that accounts for several important sources of uncertainty and error in spike sorting. In lieu of sorting neural data to produce a single best spike train, we estimate a probabilistic model of spike trains given the observed data. We show how such a distribution over spike sortings can support standard neuroscientific questions while providing a representation of uncertainty in the analysis. As a representative illustration of the approach, we analyzed primary motor cortical tuning with respect to hand movement in data recorded with a chronic multi-electrode array in non-human primates.We found that the probabilistic analysis generally agrees with human sorters but suggests the presence of tuned units not detected by humans.

pdf preprint pdf from publisher PubMed [BibTex]

2008

pdf preprint pdf from publisher PubMed [BibTex]


Thumb xl thumb screen shot 2012 10 06 at 12.23.39 pm
Dynamic time warping for binocular hand tracking and reconstruction

Romero, J., Kragic, D., Kyrki, V., Argyros, A.

In IEEE International Conference on Robotics and Automation,ICRA, pages: 2289 -2294, May 2008 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


Thumb xl pointclickimagesmall2
Neural control of computer cursor velocity by decoding motor cortical spiking activity in humans with tetraplegia

(J. Neural Engineering Highlights of 2008 Collection)

Kim, S., Simeral, J., Hochberg, L., Donoghue, J. P., Black, M. J.

J. Neural Engineering, 5, pages: 455–476, 2008 (article)

Abstract
Computer-mediated connections between human motor cortical neurons and assistive devices promise to improve or restore lost function in people with paralysis. Recently, a pilot clinical study of an intracortical neural interface system demonstrated that a tetraplegic human was able to obtain continuous two-dimensional control of a computer cursor using neural activity recorded from his motor cortex. This control, however, was not sufficiently accurate for reliable use in many common computer control tasks. Here, we studied several central design choices for such a system including the kinematic representation for cursor movement, the decoding method that translates neuronal ensemble spiking activity into a control signal and the cursor control task used during training for optimizing the parameters of the decoding method. In two tetraplegic participants, we found that controlling a cursor’s velocity resulted in more accurate closed-loop control than controlling its position directly and that cursor velocity control was achieved more rapidly than position control. Control quality was further improved over conventional linear filters by using a probabilistic method, the Kalman filter, to decode human motor cortical activity. Performance assessment based on standard metrics used for the evaluation of a wide range of pointing devices demonstrated significantly improved cursor control with velocity rather than position decoding.

pdf preprint pdf from publisher [BibTex]

pdf preprint pdf from publisher [BibTex]


Thumb xl woodtr
Incremental nonparametric Bayesian regression

Wood, F., Grollman, D. H., Heller, K. A., Jenkins, O. C., Black, M. J.

(CS-08-07), Brown University, Department of Computer Science, 2008 (techreport)

pdf [BibTex]

pdf [BibTex]


Thumb xl jmiv08brownian
Brownian Warps for Non-Rigid Registration

Mads Nielsen, Peter Johansen, Andrew Jackson, Benny Lautrup, Soren Hauberg

Journal of Mathematical Imaging and Vision, 31, pages: 221-231, Springer Netherlands, 2008 (article)

Publishers site PDF [BibTex]

Publishers site PDF [BibTex]


Thumb xl thumb screen shot 2012 10 06 at 12.28.24 pm
Simultaneous Visual Recognition of Manipulation Actions and Manipulated Objects

Kjellström, H., Romero, J., Martinez, D., Kragic, D.

In European Conference on Computer Vision, ECCV, pages: 336-349, 2008 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


no image
Tuning analysis of motor cortical neurons in a person with paralysis during performance of visually instructed cursor control tasks

Kim, S., Simeral, J. D., Hochberg, L. R., Truccolo, W., Donoghue, J., Friehs, G. M., Black, M. J.

2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

[BibTex]


Thumb xl screen shot 2012 06 06 at 11.28.04 am
Infinite Kernel Learning

Gehler, P., Nowozin, S.

In Proceedings of NIPS 2008 Workshop on "Kernel Learning: Automatic Selection of Optimal Kernels", 2008 (inproceedings)

project page pdf [BibTex]

project page pdf [BibTex]


Thumb xl jmiv08theater
An Efficient Algorithm for Modelling Duration in Hidden Markov Models, with a Dramatic Application

Soren Hauberg, Jakob Sloth

Journal of Mathematical Imaging and Vision, 31, pages: 165-170, Springer Netherlands, 2008 (article)

Publishers site Paper site PDF [BibTex]

Publishers site Paper site PDF [BibTex]


Thumb xl thumb screen shot 2012 10 06 at 12.29.08 pm
Visual Recognition of Grasps for Human-to-Robot Mapping

Kjellström, H., Romero, J., Kragic, D.

In IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS, pages: 3192-3199, 2008 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


no image
More than two years of intracortically-based cursor control via a neural interface system

Hochberg, L. R., Simeral, J. D., Kim, S., Stein, J., Friehs, G. M., Black, M. J., Donoghue, J. P.

2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

[BibTex]


no image
Decoding of reach and grasp from MI population spiking activity using a low-dimensional model of hand and arm posture

Yadollahpour, P., Shakhnarovich, G., Vargas-Irwin, C., Donoghue, J. P., Black, M. J.

2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

[BibTex]


no image
Neural activity in the motor cortex of humans with tetraplegia

Donoghue, J., Simeral, J., Black, M., Kim, S., Truccolo, W., Hochberg, L.

AREADNE Research in Encoding And Decoding of Neural Ensembles, June, Santorini, Greece, 2008 (conference)

[BibTex]

[BibTex]


Thumb xl trajectory nips
Nonrigid Structure from Motion in Trajectory Space

Akhter, I., Sheikh, Y., Khan, S., Kanade, T.

In Neural Information Processing Systems, 1(2):41-48, 2008 (inproceedings)

Abstract
Existing approaches to nonrigid structure from motion assume that the instantaneous 3D shape of a deforming object is a linear combination of basis shapes, which have to be estimated anew for each video sequence. In contrast, we propose that the evolving 3D structure be described by a linear combination of basis trajectories. The principal advantage of this approach is that we do not need to estimate any basis vectors during computation. We show that generic bases over trajectories, such as the Discrete Cosine Transform (DCT) basis, can be used to compactly describe most real motions. This results in a significant reduction in unknowns, and corresponding stability in estimation. We report empirical performance, quantitatively using motion capture data, and qualitatively on several video sequences exhibiting nonrigid motions including piece-wise rigid motion, partially nonrigid motion (such as a facial expression), and highly nonrigid motion (such as a person dancing).

pdf project page [BibTex]

pdf project page [BibTex]


Thumb xl sigalnips
Combined discriminative and generative articulated pose and non-rigid shape estimation

Sigal, L., Balan, A., Black, M. J.

In Advances in Neural Information Processing Systems 20, NIPS-2007, pages: 1337–1344, MIT Press, 2008 (inproceedings)

pdf [BibTex]

pdf [BibTex]


no image
Reconstructing reach and grasp actions using neural population activity from Primary Motor Cortex

Vargas-Irwin, C. E., Yadollahpour, P., Shakhnarovich, G., Black, M. J., Donoghue, J. P.

2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

[BibTex]

1996


Thumb xl bildschirmfoto 2013 01 14 um 10.40.24
Cardboard people: A parameterized model of articulated motion

Ju, S. X., Black, M. J., Yacoob, Y.

In 2nd Int. Conf. on Automatic Face- and Gesture-Recognition, pages: 38-44, Killington, Vermont, October 1996 (inproceedings)

Abstract
We extend the work of Black and Yacoob on the tracking and recognition of human facial expressions using parameterized models of optical flow to deal with the articulated motion of human limbs. We define a "cardboard person model" in which a person's limbs are represented by a set of connected planar patches. The parameterized image motion of these patches is constrained to enforce articulated motion and is solved for directly using a robust estimation technique. The recovered motion parameters provide a rich and concise description of the activity that can be used for recognition. We propose a method for performing view-based recognition of human activities from the optical flow parameters that extends previous methods to cope with the cyclical nature of human motion. We illustrate the method with examples of tracking human legs over long image sequences.

pdf [BibTex]

1996

pdf [BibTex]


Thumb xl bildschirmfoto 2012 12 07 um 11.52.07
Estimating optical flow in segmented images using variable-order parametric models with local deformations

Black, M. J., Jepson, A.

IEEE Transactions on Pattern Analysis and Machine Intelligence, 18(10):972-986, October 1996 (article)

Abstract
This paper presents a new model for estimating optical flow based on the motion of planar regions plus local deformations. The approach exploits brightness information to organize and constrain the interpretation of the motion by using segmented regions of piecewise smooth brightness to hypothesize planar regions in the scene. Parametric flow models are estimated in these regions in a two step process which first computes a coarse fit and estimates the appropriate parameterization of the motion of the region (two, six, or eight parameters). The initial fit is refined using a generalization of the standard area-based regression approaches. Since the assumption of planarity is likely to be violated, we allow local deformations from the planar assumption in the same spirit as physically-based approaches which model shape using coarse parametric models plus local deformations. This parametric+deformation model exploits the strong constraints of parametric approaches while retaining the adaptive nature of regularization approaches. Experimental results on a variety of images indicate that the parametric+deformation model produces accurate flow estimates while the incorporation of brightness segmentation provides precise localization of motion boundaries.

pdf pdf from publisher [BibTex]

pdf pdf from publisher [BibTex]


Thumb xl bildschirmfoto 2012 12 07 um 11.59.00
On the unification of line processes, outlier rejection, and robust statistics with applications in early vision

Black, M., Rangarajan, A.

International Journal of Computer Vision , 19(1):57-92, July 1996 (article)

Abstract
The modeling of spatial discontinuities for problems such as surface recovery, segmentation, image reconstruction, and optical flow has been intensely studied in computer vision. While “line-process” models of discontinuities have received a great deal of attention, there has been recent interest in the use of robust statistical techniques to account for discontinuities. This paper unifies the two approaches. To achieve this we generalize the notion of a “line process” to that of an analog “outlier process” and show how a problem formulated in terms of outlier processes can be viewed in terms of robust statistics. We also characterize a class of robust statistical problems for which an equivalent outlier-process formulation exists and give a straightforward method for converting a robust estimation problem into an outlier-process formulation. We show how prior assumptions about the spatial structure of outliers can be expressed as constraints on the recovered analog outlier processes and how traditional continuation methods can be extended to the explicit outlier-process formulation. These results indicate that the outlier-process approach provides a general framework which subsumes the traditional line-process approaches as well as a wide class of robust estimation problems. Examples in surface reconstruction, image segmentation, and optical flow are presented to illustrate the use of outlier processes and to show how the relationship between outlier processes and robust statistics can be exploited. An appendix provides a catalog of common robust error norms and their equivalent outlier-process formulations.

pdf pdf from publisher DOI [BibTex]


Thumb xl bildschirmfoto 2013 01 14 um 10.48.32
Skin and Bones: Multi-layer, locally affine, optical flow and regularization with transparency

(Nominated: Best paper)

Ju, S., Black, M. J., Jepson, A. D.

In IEEE Conf. on Computer Vision and Pattern Recognition, CVPR’96, pages: 307-314, San Francisco, CA, June 1996 (inproceedings)

pdf [BibTex]

pdf [BibTex]


Thumb xl bildschirmfoto 2013 01 14 um 10.52.58
EigenTracking: Robust matching and tracking of articulated objects using a view-based representation

Black, M. J., Jepson, A.

In Proc. Fourth European Conf. on Computer Vision, ECCV’96, pages: 329-342, LNCS 1064, Springer Verlag, Cambridge, England, April 1996 (inproceedings)

pdf video [BibTex]

pdf video [BibTex]


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Mixture Models for Image Representation

Jepson, A., Black, M.

PRECARN ARK Project Technical Report ARK96-PUB-54, March 1996 (techreport)

Abstract
We consider the estimation of local greylevel image structure in terms of a layered representation. This type of representation has recently been successfully used to segment various objects from clutter using either optical ow or stereo disparity information. We argue that the same type of representation is useful for greylevel data in that it allows for the estimation of properties for each of several different components without prior segmentation. Our emphasis in this paper is on the process used to extract such a layered representation from a given image In particular we consider a variant of the EM algorithm for the estimation of the layered model and consider a novel technique for choosing the number of layers to use. We briefly consider the use of a simple version of this approach for image segmentation and suggest two potential applications to the ARK project

pdf [BibTex]

pdf [BibTex]


Thumb xl bildschirmfoto 2012 12 07 um 12.09.01
The robust estimation of multiple motions: Parametric and piecewise-smooth flow fields

Black, M. J., Anandan, P.

Computer Vision and Image Understanding, 63(1):75-104, January 1996 (article)

Abstract
Most approaches for estimating optical flow assume that, within a finite image region, only a single motion is present. This single motion assumption is violated in common situations involving transparency, depth discontinuities, independently moving objects, shadows, and specular reflections. To robustly estimate optical flow, the single motion assumption must be relaxed. This paper presents a framework based on robust estimation that addresses violations of the brightness constancy and spatial smoothness assumptions caused by multiple motions. We show how the robust estimation framework can be applied to standard formulations of the optical flow problem thus reducing their sensitivity to violations of their underlying assumptions. The approach has been applied to three standard techniques for recovering optical flow: area-based regression, correlation, and regularization with motion discontinuities. This paper focuses on the recovery of multiple parametric motion models within a region, as well as the recovery of piecewise-smooth flow fields, and provides examples with natural and synthetic image sequences.

pdf pdf from publisher [BibTex]

pdf pdf from publisher [BibTex]

1994


Thumb xl bildschirmfoto 2013 01 14 um 11.32.33
Estimating multiple independent motions in segmented images using parametric models with local deformations

Black, M. J., Jepson, A.

In Workshop on Non-rigid and Articulate Motion, pages: 220-227, Austin, Texas, November 1994 (inproceedings)

pdf abstract [BibTex]

1994

pdf abstract [BibTex]


Thumb xl spiettc
Time to contact from active tracking of motion boundaries

Ju, X., Black, M. J.

In Intelligent Robots and Computer Vision XIII: 3D Vision, Product Inspection, and Active Vision, pages: 26-37, Proc. SPIE 2354, Boston, Massachusetts, November 1994 (inproceedings)

pdf abstract [BibTex]

pdf abstract [BibTex]


Thumb xl cviu
A computational and evolutionary perspective on the role of representation in computer vision

Tarr, M. J., Black, M. J.

CVGIP: Image Understanding, 60(1):65-73, July 1994 (article)

Abstract
Recently, the assumed goal of computer vision, reconstructing a representation of the scene, has been critcized as unproductive and impractical. Critics have suggested that the reconstructive approach should be supplanted by a new purposive approach that emphasizes functionality and task driven perception at the cost of general vision. In response to these arguments, we claim that the recovery paradigm central to the reconstructive approach is viable, and, moreover, provides a promising framework for understanding and modeling general purpose vision in humans and machines. An examination of the goals of vision from an evolutionary perspective and a case study involving the recovery of optic flow support this hypothesis. In particular, while we acknowledge that there are instances where the purposive approach may be appropriate, these are insufficient for implementing the wide range of visual tasks exhibited by humans (the kind of flexible vision system presumed to be an end-goal of artificial intelligence). Furthermore, there are instances, such as recent work on the estimation of optic flow, where the recovery paradigm may yield useful and robust results. Thus, contrary to certain claims, the purposive approach does not obviate the need for recovery and reconstruction of flexible representations of the world.

pdf [BibTex]

pdf [BibTex]


Thumb xl cviu
Reconstruction and purpose

Tarr, M. J., Black, M. J.

CVGIP: Image Understanding, 60(1):113-118, July 1994 (article)

pdf [BibTex]

pdf [BibTex]


Thumb xl bildschirmfoto 2013 01 14 um 11.39.54
The outlier process: Unifying line processes and robust statistics

Black, M., Rangarajan, A.

In IEEE Conf. on Computer Vision and Pattern Recognition, CVPR’94, pages: 15-22, Seattle, WA, June 1994 (inproceedings)

pdf abstract [BibTex]

pdf abstract [BibTex]


Thumb xl bildschirmfoto 2013 01 14 um 11.42.57
Recursive non-linear estimation of discontinuous flow fields

Black, M.

In Proc. Third European Conf. on Computer Vision, ECCV’94,, pages: 138-145, LNCS 800, Springer Verlag, Sweden, May 1994 (inproceedings)

pdf abstract [BibTex]

pdf abstract [BibTex]

1993


Thumb xl bildschirmfoto 2013 01 14 um 11.48.36
Mixture models for optical flow computation

Jepson, A., Black, M.

In IEEE Conf. on Computer Vision and Pattern Recognition, CVPR-93, pages: 760-761, New York, NY, June 1993 (inproceedings)

pdf abstract tech report [BibTex]

1993

pdf abstract tech report [BibTex]


Thumb xl bildschirmfoto 2013 01 14 um 11.52.45
A framework for the robust estimation of optical flow

(Helmholtz Prize)

Black, M. J., Anandan, P.

In Fourth International Conf. on Computer Vision, ICCV-93, pages: 231-236, Berlin, Germany, May 1993 (inproceedings)

Abstract
Most approaches for estimating optical flow assume that, within a finite image region, only a single motion is present. This single motion assumption is violated in common situations involving transparency, depth discontinuities, independently moving objects, shadows, and specular reflections. To robustly estimate optical flow, the single motion assumption must be relaxed. This work describes a framework based on robust estimation that addresses violations of the brightness constancy and spatial smoothness assumptions caused by multiple motions. We show how the robust estimation framework can be applied to standard formulations of the optical flow problem thus reducing their sensitivity to violations of their underlying assumptions. The approach has been applied to three standard techniques for recovering optical flow: area-based regression, correlation, and regularization with motion discontinuities. This work focuses on the recovery of multiple parametric motion models within a region as well as the recovery of piecewise-smooth flow fields and provides examples with natural and synthetic image sequences.

pdf video abstract code [BibTex]

pdf video abstract code [BibTex]


Thumb xl bildschirmfoto 2013 01 15 um 11.07.28
Mixture models for optical flow computation

Jepson, A., Black, M.

In Partitioning Data Sets, DIMACS Workshop, pages: 271-286, (Editors: Ingemar Cox, Pierre Hansen, and Bela Julesz), AMS Pub, Providence, RI., April 1993 (incollection)

pdf [BibTex]

pdf [BibTex]


Thumb xl ijcai
Action, representation, and purpose: Re-evaluating the foundations of computational vision

Black, M. J., Aloimonos, Y., Brown, C. M., Horswill, I., Malik, J., G. Sandini, , Tarr, M. J.

In International Joint Conference on Artificial Intelligence, IJCAI-93, pages: 1661-1666, Chambery, France, 1993 (inproceedings)

pdf [BibTex]

pdf [BibTex]