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2009


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Automatic recognition of rodent behavior: A tool for systematic phenotypic analysis

Serre, T.*, Jhuang, H*., Garrote, E., Poggio, T., Steele, A.

CBCL paper #283/MIT-CSAIL-TR #2009-052., MIT, 2009 (techreport)

pdf [BibTex]

2009

pdf [BibTex]


Thumb xl screen shot 2012 06 06 at 11.24.14 am
Let the kernel figure it out; Principled learning of pre-processing for kernel classifiers

Gehler, P., Nowozin, S.

In Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR), pages: 2836-2843, IEEE Computer Society, 2009 (inproceedings)

doi project page pdf [BibTex]

doi project page pdf [BibTex]


Thumb xl thumb screen shot 2012 10 06 at 12.04.52 pm
Monocular Real-Time 3D Articulated Hand Pose Estimation

Romero, J., Kjellström, H., Kragic, D.

In IEEE-RAS International Conference on Humanoid Robots, pages: 87-92, 2009 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


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Grasp Recognition and Mapping on Humanoid Robots

Do, M., Romero, J., Kjellström, H., Azad, P., Asfour, T., Kragic, D., Dillmann, R.

In IEEE-RAS International Conference on Humanoid Robots, pages: 465-471, 2009 (inproceedings)

Pdf Video [BibTex]

Pdf Video [BibTex]


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4D Cardiac Segmentation of the Epicardium and Left Ventricle

Pons-Moll, G., Tadmor, G., MacLeod, R. S., Rosenhahn, B., Brooks, D. H.

In World Congress of Medical Physics and Biomedical Engineering (WC), 2009 (inproceedings)

[BibTex]

[BibTex]


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Geometric Potential Force for the Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 20th British Machine Vision Conference, pages: 1-11, 2009 (inproceedings)

Abstract
We propose a new external force field for deformable models which can be conve- niently generalized to high dimensions. The external force field is based on hypothesized interactions between the relative geometries of the deformable model and image gradi- ents. The evolution of the deformable model is solved using the level set method. The dynamic interaction forces between the geometries can greatly improve the deformable model performance in acquiring complex geometries and highly concave boundaries, and in dealing with weak image edges. The new deformable model can handle arbi- trary cross-boundary initializations. Here, we show that the proposed method achieve significant improvements when compared against existing state-of-the-art techniques.

[BibTex]

[BibTex]


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Left Ventricular Regional Wall Curvedness and Wall Stress in Patients with Ischemic Dilated Cardiomyopathy

Liang Zhong, Yi Su, Si Yong Yeo, Ru San Tan Dhanjoo Ghista, Ghassan Kassab

American Journal of Physiology – Heart and Circulatory Physiology, 296(3):H573-84, 2009 (article)

Abstract
Geometric remodeling of the left ventricle (LV) after myocardial infarction is associated with changes in myocardial wall stress. The objective of this study was to determine the regional curvatures and wall stress based on three-dimensional (3-D) reconstructions of the LV using MRI. Ten patients with ischemic dilated cardiomyopathy (IDCM) and 10 normal subjects underwent MRI scan. The IDCM patients also underwent delayed gadolinium-enhancement imaging to delineate the extent of myocardial infarct. Regional curvedness, local radii of curvature, and wall thickness were calculated. The percent curvedness change between end diastole and end systole was also calculated. In normal heart, a short- and long-axis two-dimensional analysis showed a 41 +/- 11% and 45 +/- 12% increase of the mean of peak systolic wall stress between basal and apical sections, respectively. However, 3-D analysis showed no significant difference in peak systolic wall stress from basal and apical sections (P = 0.298, ANOVA). LV shape differed between IDCM patients and normal subjects in several ways: LV shape was more spherical (sphericity index = 0.62 +/- 0.08 vs. 0.52 +/- 0.06, P < 0.05), curvedness at end diastole (mean for 16 segments = 0.034 +/- 0.0056 vs. 0.040 +/- 0.0071 mm(-1), P < 0.001) and end systole (mean for 16 segments = 0.037 +/- 0.0068 vs. 0.067 +/- 0.020 mm(-1), P < 0.001) was affected by infarction, and peak systolic wall stress was significantly increased at each segment in IDCM patients. The 3-D quantification of regional wall stress by cardiac MRI provides more precise evaluation of cardiac mechanics. Identification of regional curvedness and wall stresses helps delineate the mechanisms of LV remodeling in IDCM and may help guide therapeutic LV restoration.

[BibTex]

[BibTex]


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Level Set Based Automatic Segmentation of Human Aorta

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In International Conference on Computational & Mathematical Biomedical Engineering, pages: 242-245, 2009 (inproceedings)

[BibTex]

[BibTex]


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A Curvature-Based Approach for Left Ventricular Shape Analysis from Cardiac Magnetic Resonance Imaging

Si Yong Yeo, Liang Zhong, Yi Su, Ru San Tan, Dhanjoo Ghista

Medical & Biological Engineering & Computing, 47(3):313-322, 2009 (article)

Abstract
It is believed that left ventricular (LV) regional shape is indicative of LV regional function, and cardiac pathologies are often associated with regional alterations in ventricular shape. In this article, we present a set of procedures for evaluating regional LV surface shape from anatomically accurate models reconstructed from cardiac magnetic resonance (MR) images. LV surface curvatures are computed using local surface fitting method, which enables us to assess regional LV shape and its variation. Comparisons are made between normal and diseased hearts. It is illustrated that LV surface curvatures at different regions of the normal heart are higher than those of the diseased heart. Also, the normal heart experiences a larger change in regional curvedness during contraction than the diseased heart. It is believed that with a wide range of dataset being evaluated, this approach will provide a new and efficient way of quantifying LV regional function.

link (url) [BibTex]

link (url) [BibTex]


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In Defense of Orthonormality Constraints for Nonrigid Structure from Motion

Akhter, I., Sheikh, Y., Khan, S.

In Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pages: 2447-2453, 2009 (inproceedings)

Abstract
In factorization approaches to nonrigid structure from motion, the 3D shape of a deforming object is usually modeled as a linear combination of a small number of basis shapes. The original approach to simultaneously estimate the shape basis and nonrigid structure exploited orthonormality constraints for metric rectification. Recently, it has been asserted that structure recovery through orthonormality constraints alone is inherently ambiguous and cannot result in a unique solution. This assertion has been accepted as conventional wisdom and is the justification of many remedial heuristics in literature. Our key contribution is to prove that orthonormality constraints are in fact sufficient to recover the 3D structure from image observations alone. We characterize the true nature of the ambiguity in using orthonormality constraints for the shape basis and show that it has no impact on structure reconstruction. We conclude from our experimentation that the primary challenge in using shape basis for nonrigid structure from motion is the difficulty in the optimization problem rather than the ambiguity in orthonormality constraints.

pdf [BibTex]

pdf [BibTex]


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Dynamic distortion correction for endoscopy systems with exchangeable optics

Stehle, T., Hennes, M., Gross, S., Behrens, A., Wulff, J., Aach, T.

In Bildverarbeitung für die Medizin 2009, pages: 142-146, Springer Berlin Heidelberg, 2009 (inproceedings)

Abstract
Endoscopic images are strongly affected by lens distortion caused by the use of wide angle lenses. In case of endoscopy systems with exchangeable optics, e.g. in bladder endoscopy or sinus endoscopy, the camera sensor and the optics do not form a rigid system but they can be shifted and rotated with respect to each other during an examination. This flexibility has a major impact on the location of the distortion centre as it is moved along with the optics. In this paper, we describe an algorithm for the dynamic correction of lens distortion in cystoscopy which is based on a one time calibration. For the compensation, we combine a conventional static method for distortion correction with an algorithm to detect the position and the orientation of the elliptic field of view. This enables us to estimate the position of the distortion centre according to the relative movement of camera and optics. Therewith, a distortion correction for arbitrary rotation angles and shifts becomes possible without performing static calibrations for every possible combination of shifts and angles beforehand.

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Computational mechanisms for the recognition of time sequences of images in the visual cortex

Tan, C., Jhuang, H., Singer, J., Serre, T., Sheinberg, D., Poggio, T.

Society for Neuroscience, 2009 (conference)

pdf [BibTex]

pdf [BibTex]


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Interactive Inverse Kinematics for Monocular Motion Estimation

Morten Engell-Norregaard, Soren Hauberg, Jerome Lapuyade, Kenny Erleben, Kim S. Pedersen

In The 6th Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS), 2009 (inproceedings)

Conference site Paper site [BibTex]

Conference site Paper site [BibTex]


Thumb xl thumb screen shot 2012 10 06 at 12.17.40 pm
A Comprehensive Grasp Taxonomy

Feix, T., Pawlik, R., Schmiedmayer, H., Romero, J., Kragic, D.

In Robotics, Science and Systems: Workshop on Understanding the Human Hand for Advancing Robotic Manipulation, 2009 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


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Population coding of ground truth motion in natural scenes in the early visual system

Stanley, G., Black, M. J., Lewis, J., Desbordes, G., Jin, J., Alonso, J.

COSYNE, 2009 (conference)

[BibTex]

[BibTex]


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Segmentation of Human Upper Airway Using a Level Set Based Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 13th Medical Image Understanding and Analysis, 2009 (inproceedings)

[BibTex]

[BibTex]


Thumb xl emmcvpr2009
Three Dimensional Monocular Human Motion Analysis in End-Effector Space

Soren Hauberg, Jerome Lapuyade, Morten Engell-Norregaard, Kenny Erleben, Kim S. Pedersen

In Energy Minimization Methods in Computer Vision and Pattern Recognition, 5681, pages: 235-248, Lecture Notes in Computer Science, (Editors: Cremers, Daniel and Boykov, Yuri and Blake, Andrew and Schmidt, Frank), Springer Berlin Heidelberg, 2009 (inproceedings)

Publishers site Paper site PDF [BibTex]

Publishers site Paper site PDF [BibTex]


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Decoding visual motion from correlated firing of thalamic neurons

Stanley, G. B., Black, M. J., Desbordes, G., Jin, J., Wang, Y., Alonso, J.

2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009 (conference)

[BibTex]

[BibTex]

2005


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Representing cyclic human motion using functional analysis

Ormoneit, D., Black, M. J., Hastie, T., Kjellström, H.

Image and Vision Computing, 23(14):1264-1276, December 2005 (article)

Abstract
We present a robust automatic method for modeling cyclic 3D human motion such as walking using motion-capture data. The pose of the body is represented by a time-series of joint angles which are automatically segmented into a sequence of motion cycles. The mean and the principal components of these cycles are computed using a new algorithm that enforces smooth transitions between the cycles by operating in the Fourier domain. Key to this method is its ability to automatically deal with noise and missing data. A learned walking model is then exploited for Bayesian tracking of 3D human motion.

pdf pdf from publisher DOI [BibTex]

2005

pdf pdf from publisher DOI [BibTex]


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A quantitative evaluation of video-based 3D person tracking

Balan, A. O., Sigal, L., Black, M. J.

In The Second Joint IEEE International Workshop on Visual Surveillance and Performance Evaluation of Tracking and Surveillance, VS-PETS, pages: 349-356, October 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Inferring attentional state and kinematics from motor cortical firing rates

Wood, F., Prabhat, , Donoghue, J. P., Black, M. J.

In Proc. IEEE Engineering in Medicine and Biology Society, pages: 1544-1547, September 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Motor cortical decoding using an autoregressive moving average model

Fisher, J., Black, M. J.

In Proc. IEEE Engineering in Medicine and Biology Society, pages: 1469-1472, September 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Fields of Experts: A framework for learning image priors

Roth, S., Black, M. J.

In IEEE Conf. on Computer Vision and Pattern Recognition, 2, pages: 860-867, June 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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A Flow-Based Approach to Vehicle Detection and Background Mosaicking in Airborne Video

Yalcin, H. C. R. B. M. J. H. M.

IEEE Conf. on Computer Vision and Pattern Recognition (CVPR), Video Proceedings,, pages: 1202, 2005 (patent)

YouTube pdf [BibTex]

YouTube pdf [BibTex]


Thumb xl iccv05roth
On the spatial statistics of optical flow

(Marr Prize, Honorable Mention)

Roth, S., Black, M. J.

In International Conf. on Computer Vision, International Conf. on Computer Vision, pages: 42-49, 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Modeling neural population spiking activity with Gibbs distributions

Wood, F., Roth, S., Black, M. J.

In Advances in Neural Information Processing Systems 18, pages: 1537-1544, 2005 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Energy-based models of motor cortical population activity

Wood, F., Black, M.

Program No. 689.20. 2005 Abstract Viewer/Itinerary Planner, Society for Neuroscience, Washington, DC, 2005 (conference)

abstract [BibTex]

abstract [BibTex]

2000


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Probabilistic detection and tracking of motion boundaries

Black, M. J., Fleet, D. J.

Int. J. of Computer Vision, 38(3):231-245, July 2000 (article)

Abstract
We propose a Bayesian framework for representing and recognizing local image motion in terms of two basic models: translational motion and motion boundaries. Motion boundaries are represented using a non-linear generative model that explicitly encodes the orientation of the boundary, the velocities on either side, the motion of the occluding edge over time, and the appearance/disappearance of pixels at the boundary. We represent the posterior probability distribution over the model parameters given the image data using discrete samples. This distribution is propagated over time using a particle filtering algorithm. To efficiently represent such a high-dimensional space we initialize samples using the responses of a low-level motion discontinuity detector. The formulation and computational model provide a general probabilistic framework for motion estimation with multiple, non-linear, models.

pdf pdf from publisher Video [BibTex]

2000

pdf pdf from publisher Video [BibTex]


Thumb xl bildschirmfoto 2012 12 11 um 12.12.25
Stochastic tracking of 3D human figures using 2D image motion

(Winner of the 2010 Koenderink Prize for Fundamental Contributions in Computer Vision)

Sidenbladh, H., Black, M. J., Fleet, D.

In European Conference on Computer Vision, ECCV, pages: 702-718, LNCS 1843, Springer Verlag, Dublin, Ireland, June 2000 (inproceedings)

Abstract
A probabilistic method for tracking 3D articulated human figures in monocular image sequences is presented. Within a Bayesian framework, we define a generative model of image appearance, a robust likelihood function based on image gray level differences, and a prior probability distribution over pose and joint angles that models how humans move. The posterior probability distribution over model parameters is represented using a discrete set of samples and is propagated over time using particle filtering. The approach extends previous work on parameterized optical flow estimation to exploit a complex 3D articulated motion model. It also extends previous work on human motion tracking by including a perspective camera model, by modeling limb self occlusion, and by recovering 3D motion from a monocular sequence. The explicit posterior probability distribution represents ambiguities due to image matching, model singularities, and perspective projection. The method relies only on a frame-to-frame assumption of brightness constancy and hence is able to track people under changing viewpoints, in grayscale image sequences, and with complex unknown backgrounds.

pdf code [BibTex]

pdf code [BibTex]


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Functional analysis of human motion data

Ormoneit, D., Hastie, T., Black, M. J.

In In Proc. 5th World Congress of the Bernoulli Society for Probability and Mathematical Statistics and 63rd Annual Meeting of the Institute of Mathematical Statistics, Guanajuato, Mexico, May 2000 (inproceedings)

[BibTex]

[BibTex]


no image
Stochastic modeling and tracking of human motion

Ormoneit, D., Sidenbladh, H., Black, M. J., Hastie, T.

Learning 2000, Snowbird, UT, April 2000 (conference)

abstract [BibTex]

abstract [BibTex]


Thumb xl bildschirmfoto 2012 12 12 um 11.40.47
A framework for modeling the appearance of 3D articulated figures

Sidenbladh, H., De la Torre, F., Black, M. J.

In Int. Conf. on Automatic Face and Gesture Recognition, pages: 368-375, Grenoble, France, March 2000 (inproceedings)

pdf [BibTex]

pdf [BibTex]


Thumb xl bildschirmfoto 2012 12 06 um 09.22.34
Design and use of linear models for image motion analysis

Fleet, D. J., Black, M. J., Yacoob, Y., Jepson, A. D.

Int. J. of Computer Vision, 36(3):171-193, 2000 (article)

Abstract
Linear parameterized models of optical flow, particularly affine models, have become widespread in image motion analysis. The linear model coefficients are straightforward to estimate, and they provide reliable estimates of the optical flow of smooth surfaces. Here we explore the use of parameterized motion models that represent much more varied and complex motions. Our goals are threefold: to construct linear bases for complex motion phenomena; to estimate the coefficients of these linear models; and to recognize or classify image motions from the estimated coefficients. We consider two broad classes of motions: i) generic “motion features” such as motion discontinuities and moving bars; and ii) non-rigid, object-specific, motions such as the motion of human mouths. For motion features we construct a basis of steerable flow fields that approximate the motion features. For object-specific motions we construct basis flow fields from example motions using principal component analysis. In both cases, the model coefficients can be estimated directly from spatiotemporal image derivatives with a robust, multi-resolution scheme. Finally, we show how these model coefficients can be use to detect and recognize specific motions such as occlusion boundaries and facial expressions.

pdf [BibTex]

pdf [BibTex]


Thumb xl bildschirmfoto 2012 12 06 um 09.48.16
Robustly estimating changes in image appearance

Black, M. J., Fleet, D. J., Yacoob, Y.

Computer Vision and Image Understanding, 78(1):8-31, 2000 (article)

Abstract
We propose a generalized model of image “appearance change” in which brightness variation over time is represented as a probabilistic mixture of different causes. We define four generative models of appearance change due to (1) object or camera motion; (2) illumination phenomena; (3) specular reflections; and (4) “iconic changes” which are specific to the objects being viewed. These iconic changes include complex occlusion events and changes in the material properties of the objects. We develop a robust statistical framework for recovering these appearance changes in image sequences. This approach generalizes previous work on optical flow to provide a richer description of image events and more reliable estimates of image motion in the presence of shadows and specular reflections.

pdf pdf from publisher DOI [BibTex]

pdf pdf from publisher DOI [BibTex]